{"id":1389,"date":"2014-10-20T14:21:29","date_gmt":"2014-10-20T05:21:29","guid":{"rendered":"http:\/\/www.lookingatnothing.com\/?p=1389"},"modified":"2014-10-25T07:52:56","modified_gmt":"2014-10-24T22:52:56","slug":"contrast-variation-saxs","status":"publish","type":"post","link":"https:\/\/lookingatnothing.com\/index.php\/archives\/1389","title":{"rendered":"Contrast-variation SAXS"},"content":{"rendered":"<p>Contrast variation is commonly used in SANS to highlight a single segment of a mutli-part structure. In SANS it is easy to do this because a wide range of scattering length densities can be accessed by simple mixing of water and deuterated water. In SAXS this is not so easy. A recent <a href=\"http:\/\/arxiv.org\/abs\/1409.1776\">arXiv paper<\/a> [1] by <a href=\"https:\/\/www.researchgate.net\/profile\/Raul_Garcia-Diez\">Raul Garcia-Diez<\/a>, however, shows one method for getting it done in SAXS. <!--more--><\/p>\n<p>Contrast variation SAXS (CV-SAXS) is typically done by immersion in a (mixture or variety of) solvent(s). For porous structures, contrast variation can be used to study the different types of pores: outside accessible and inaccessible pores. By immersion in a solvent, they can be quantified and dynamics studied [2, 3, 4] (the references happen to be all fibre examples, due to my previous research topic focus&#8230;).<\/p>\n<figure id=\"attachment_1395\" aria-describedby=\"caption-attachment-1395\" style=\"width: 150px\" class=\"wp-caption alignright\"><a href=\"http:\/\/www.lookingatnothing.com\/wp-content\/uploads\/2014\/10\/sucrose-theory.png\"><img loading=\"lazy\" decoding=\"async\" class=\"size-thumbnail wp-image-1395\" src=\"http:\/\/www.lookingatnothing.com\/wp-content\/uploads\/2014\/10\/sucrose-theory-150x150.png\" alt=\"Electron densities accessible through mixtures of water and sucrose. Image courtesy of Raul Garcia Diez\" width=\"150\" height=\"150\" \/><\/a><figcaption id=\"caption-attachment-1395\" class=\"wp-caption-text\"><strong>Figure 0:<\/strong> Electron densities accessible through mixtures of water and sucrose. Image courtesy of Raul Garcia Diez<\/figcaption><\/figure>\n<p>For multi-part structures (core-shell particles, vesicles), CV-SAXS can separate the sizes of the constituent parts. In this case, the structure would be suspended in a series of solvent mixtures with varying scattering length densities (SLDs) (c.f. Garcia-Diez&#8217; paper). As it is tedious and risky to prepare series of accurate solvent mixtures, he chose to use a solvent density gradient with water and sucrose (Figure 0). To be honest, gradients are a very smart way of accessing a wide range of conditions, and I think it is a very good choice here as well.<\/p>\n<figure id=\"attachment_1390\" aria-describedby=\"caption-attachment-1390\" style=\"width: 150px\" class=\"wp-caption alignright\"><a href=\"http:\/\/www.lookingatnothing.com\/wp-content\/uploads\/2014\/10\/contrastmatching.png\"><img loading=\"lazy\" decoding=\"async\" class=\"size-thumbnail wp-image-1390\" src=\"http:\/\/www.lookingatnothing.com\/wp-content\/uploads\/2014\/10\/contrastmatching-150x150.png\" alt=\"General idea of contrast matching core-shell particles in a gradient\" width=\"150\" height=\"150\" \/><\/a><figcaption id=\"caption-attachment-1390\" class=\"wp-caption-text\"><strong>Figure 1:<\/strong> General idea of contrast matching core-shell particles in a gradient<\/figcaption><\/figure>\n<p>He creates this by injecting the analyte in a solvent mixture with high SLD at one end of a capillary, and the analyte in a solvent mixture of low SLD on top of that These will slowly mix, and during the mixing process there will be a well-defined SLD gradient from one end of the capillary to the other (with a uniform concentration of analyte). By measuring at various locations along the capillary and along the time-axis, a wide range of SLD contrasts between solvent and analyte are accessed (Figure 1).<\/p>\n<figure id=\"attachment_1394\" aria-describedby=\"caption-attachment-1394\" style=\"width: 150px\" class=\"wp-caption alignright\"><a href=\"http:\/\/www.lookingatnothing.com\/wp-content\/uploads\/2014\/10\/fig_blog_small.png\"><img loading=\"lazy\" decoding=\"async\" class=\"size-thumbnail wp-image-1394\" src=\"http:\/\/www.lookingatnothing.com\/wp-content\/uploads\/2014\/10\/fig_blog_small-150x150.png\" alt=\"Selected scattering curves for a contrast variation SAXS experiment. Image provided by Raul Garcia Diez. \" width=\"150\" height=\"150\" \/><\/a><figcaption id=\"caption-attachment-1394\" class=\"wp-caption-text\"><strong>Figure 2:<\/strong> Selected scattering curves for a contrast variation SAXS experiment. Image provided by Raul Garcia Diez.<\/figcaption><\/figure>\n<p>The analysis of CV-SAXS data (Figure 2)\u00a0 is a little more complex because you have a number of datasets of the same structure but with different contrasts. As not much software can deal with this, you are invariably left to write your own fitting method. Let&#8217;s hope this will be resolved in the near future, as it is a time-consuming (though instructive) task.<\/p>\n<p>R. Garcia-Diez applied several analysis methods to his data, including a basic Guinier fit and a more elaborate least-squares fitting procedure with classical scattering functions. The least-squares fitting offers a close match to the expected value (and valuable uncertainty estimates). The Guinier method (which needs the polydispersity estimate from the least-squares fit) comes quite close but only after expansion (de-approximation?) of the Guinier approximation to a full sphere scattering function. It is also applied to a smaller range of data, and particularly that data more sensitive to background subtraction issues. Overall, then, the more elaborate least-squares way is the way forward.<\/p>\n<p>The results are very promising indeed, especially given the low contrast in the investigated structures. It is my hope that CV-SAXS can be used alongside ASAXS in the future to get a more consituent-sensitive insight into multi-part structures.<\/p>\n<p>[1] R. Garcia-Diez, C. Gollwitzer, M. Krumrey. <a href=\"http:\/\/arxiv.org\/abs\/1409.1776\">Nanoparticle characterization by means of continuous contrast variation in SAXS with a solvent density gradient.<\/a> arXiv:1409.1776 (2014).<\/p>\n<p>[2] F. Stern. <a href=\"http:\/\/dx.doi.org\/10.1039\/TF9555100430\">Dependence on moisture content of the small angle X-ray scattering power of cellulose fibres.<\/a> Trans. Faraday Soc. 51: 430, 1955\u00a0 DOI: 10.1039\/TF9555100430<\/p>\n<p>[3] K. Saijo, O. Arimoto, T. Hashimoto, M. Fukuda, and H. Kawai. <a href=\"http:\/\/dx.doi.org\/10.1016\/0032-3861(94)90502-9\">Moisture sorption mechanism of aromatic polyamide fibres: diffusion of moisture into regular kevlar as observed by small-angle x-ray scattering technique.<\/a> Polymer, 35:496\u2013503, 1994.<\/p>\n<p>[4] D. A. Mooney and J. M. D. MacElroy. <a href=\"http:\/\/dx.doi.org\/10.1021\/la7017538\">Differential water sorption studies on kevlar 49 and as-polymerised poly(p-phenylene terephthalamide): adsorption and desorption isotherms.<\/a> Chemical Engineering Science, 59:2159\u20142170, Apr 2004.<\/p>\n","protected":false},"excerpt":{"rendered":"<div class=\"mh-excerpt\"><p>Contrast variation is commonly used in SANS to highlight a single segment of a mutli-part structure. In SANS it is easy to do this because <a class=\"mh-excerpt-more\" href=\"https:\/\/lookingatnothing.com\/index.php\/archives\/1389\" title=\"Contrast-variation SAXS\">[&#8230;]<\/a><\/p>\n<\/div>","protected":false},"author":2,"featured_media":1390,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":4,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[1],"tags":[],"class_list":["post-1389","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-uncategorized"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"https:\/\/lookingatnothing.com\/wp-content\/uploads\/2014\/10\/contrastmatching.png","jetpack_shortlink":"https:\/\/wp.me\/p1gZ2v-mp","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/posts\/1389","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/comments?post=1389"}],"version-history":[{"count":3,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/posts\/1389\/revisions"}],"predecessor-version":[{"id":1396,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/posts\/1389\/revisions\/1396"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/media\/1390"}],"wp:attachment":[{"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/media?parent=1389"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/categories?post=1389"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/tags?post=1389"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}