{"id":953,"date":"2014-01-06T13:55:20","date_gmt":"2014-01-06T04:55:20","guid":{"rendered":"http:\/\/www.lookingatnothing.com\/?p=953"},"modified":"2014-01-07T11:49:49","modified_gmt":"2014-01-07T02:49:49","slug":"applied-metrology-example-from-literature-and-new-new-years-saxs-resolutions","status":"publish","type":"post","link":"https:\/\/lookingatnothing.com\/index.php\/archives\/953","title":{"rendered":"Applied metrology example from literature, and new new-year&#8217;s SAXS resolutions"},"content":{"rendered":"<p>Welcome to the new year, may it be even more fun than the last! For today, I have two items on the menu: a paper that came to my attention and some fresh new-years resolutions&#8230;<!--more--><\/p>\n<p><span style=\"line-height: 1.5em;\">First of all, I&#8217;d like to highlight <\/span><a style=\"line-height: 1.5em;\" href=\"http:\/\/arxiv.org\/abs\/1312.6812\">a paper<\/a><span style=\"line-height: 1.5em;\"> which has come to my attention via Twitter (thanks to user @<\/span><a style=\"line-height: 1.5em;\" href=\"https:\/\/twitter.com\/andiedg\">andiedg<\/a><span style=\"line-height: 1.5em;\">). In this paper, the authors are presenting a thorough discussion disproving the notion of &#8220;stripy nanoparticles&#8221;. These functionalised nanoparticles were observed to have a patterned surface in SPM, after which such patterns were substantiated with other techniques such as NMR, TEM and <\/span><a style=\"line-height: 1.5em;\" href=\"http:\/\/pubs.rsc.org\/En\/content\/articlelanding\/2013\/sc\/c3sc52595c#!divAbstract\">SANS<\/a><span style=\"line-height: 1.5em;\">. It turns out, however, that many of the observations are explainable as (and more consistent with) instrumental artefacts (<em>[ed. 3]<\/em> indications that something might be askew also arose late 2012 <a href=\"http:\/\/dx.doi.org\/10.1002\/smll.201001465\">in this paper<\/a>). It is, to me, a very good example of the field of Applied Metrology (which I have found to be my field as well), as it shows how a deeper understanding of the measurement technique can help prevent faulty conclusions.<\/span><\/p>\n<p>The author furthermore highlights how he got to work on this topic in his blog post <a href=\"http:\/\/raphazlab.wordpress.com\/2013\/12\/26\/open-science-to-settle-stripy-controversy\/\">here<\/a>. <del>Interestingly, the authors of the original &#8220;stripy nanoparticles&#8221;-papers appear to have been not unwilling to share their data and discuss some of the results.<\/del>\u00a0<em>[see ed. comments 1 and 2 below]<\/em> It turns out to have been <a href=\"http:\/\/raphazlab.wordpress.com\/2013\/05\/28\/browsing-the-archive\/\">quite<\/a> <a href=\"http:\/\/raphazlab.wordpress.com\/2013\/05\/28\/browsing-the-archive\/\">difficult <\/a>to get copies of the original datasets, and publishers seemed equally<a href=\"https:\/\/pubpeer.com\/publications\/B02C5ED24DB280ABD0FCC59B872D04\"> disinterested in publishing reinterpreted\/scrutinised data<\/a>.\u00a0Furthermore, the paper stresses that the faulty conclusions could have been avoided by &#8220;adopting an extremely critical, systematic and sceptical approach to SPM imaging of nano structured samples&#8221;. Perhaps the SAXS community can learn from these experiences to ensure that we only publish critically appraised, well-corrected and thoroughly analysed data.<\/p>\n<p><em>[edit: Based on the additional insight from the authors in the comments below, the following has been modified: 1. The provision of data by the authors of the original stripy nanoparticles was not necessarily all that forthcoming. 2. journals were not that keen on publishing a reinterpretation of data. 3. Another paper highlighting some issues with the stripy nanoparticles has been added<\/em><em>]<\/em><\/p>\n<p>Onwards to the new year resolutions! Last year I promised quite a bit, and delivered on a few of them (see<a href=\"http:\/\/www.lookingatnothing.com\/index.php\/archives\/949\"> last blog post<\/a>). This year it&#8217;s not going to change much. While I have less of an overview of what the coming year is going to be like, a few items come to mind:<\/p>\n<ol>\n<li>About 3-4 publications, with 1-2 first-author papers (in the pipeline are: one on the data correction code (maybe), one on the instrument development, one on some nanoparticle growth studies from my previous position and one on the 2D MC method),<\/li>\n<li>I&#8217;ll get the BH machine to become operational (provided the generator plays along a bit with this),<\/li>\n<li>Get a permanent position before the year (and the current contract) is up,<\/li>\n<li>Have fun, play around and break things&#8230; That&#8217;s pretty much a given.<\/li>\n<li>A LookingAtNothing post at least once every two weeks.<\/li>\n<\/ol>\n<p>Feel free to leave comments and\/or resolutions below!<\/p>\n","protected":false},"excerpt":{"rendered":"<div class=\"mh-excerpt\"><p>Welcome to the new year, may it be even more fun than the last! For today, I have two items on the menu: a paper <a class=\"mh-excerpt-more\" href=\"https:\/\/lookingatnothing.com\/index.php\/archives\/953\" title=\"Applied metrology example from literature, and new new-year&#8217;s SAXS resolutions\">[&#8230;]<\/a><\/p>\n<\/div>","protected":false},"author":1,"featured_media":955,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":4,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[1],"tags":[],"class_list":["post-953","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-uncategorized"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"https:\/\/lookingatnothing.com\/wp-content\/uploads\/2014\/01\/Firework_II_by_toQDuj.jpg","jetpack_shortlink":"https:\/\/wp.me\/p1gZ2v-fn","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/posts\/953","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/comments?post=953"}],"version-history":[{"count":6,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/posts\/953\/revisions"}],"predecessor-version":[{"id":960,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/posts\/953\/revisions\/960"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/media\/955"}],"wp:attachment":[{"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/media?parent=953"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/categories?post=953"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/lookingatnothing.com\/index.php\/wp-json\/wp\/v2\/tags?post=953"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}